Protein–RNA interactions for Protein: A5D8V6

VPS37C, Vacuolar protein sorting-associated protein 37C, humanhuman

Predicted RBP Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37CA5D8V6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 FAM220BP-201ENST00000377689 816 ntBASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SPCS2P4-201ENST00000436160 681 ntBASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SPDYE11-202ENST00000450699 704 ntBASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 KRT8P48-201ENST00000515599 1220 ntBASIC18.49■□□□□ 0.55
VPS37CA5D8V6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 FAM86C2P-203ENST00000528684 1004 ntBASIC18.49■□□□□ 0.55
VPS37CA5D8V6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 AP000842.3-202ENST00000569238 1080 ntBASIC18.49■□□□□ 0.55
VPS37CA5D8V6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SPDYE9P-201ENST00000570642 692 ntBASIC18.49■□□□□ 0.55
VPS37CA5D8V6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SPDYE10P-202ENST00000612005 668 ntBASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SPDYE8P-202ENST00000612377 668 ntBASIC18.49■□□□□ 0.55
VPS37CA5D8V6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS37CA5D8V6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 CYP4F24P-201ENST00000586049 1580 ntBASIC18.47■□□□□ 0.55
VPS37CA5D8V6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 HLA-H-201ENST00000383620 1096 ntBASIC18.47■□□□□ 0.55
VPS37CA5D8V6 TIMM8BP1-201ENST00000452384 211 ntBASIC18.47■□□□□ 0.55
VPS37CA5D8V6 AC079140.1-201ENST00000508039 487 ntBASIC18.47■□□□□ 0.55
VPS37CA5D8V6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.47■□□□□ 0.55
VPS37CA5D8V6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms