Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 AL359881.2-201ENST00000602973 570 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 AC023824.1-201ENST00000562945 2975 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 CYP4F24P-201ENST00000586049 1580 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 AL122018.1-201ENST00000446607 2310 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RPH3AQ9Y2J0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPH3AQ9Y2J0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RPH3AQ9Y2J0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.58□□□□□ -0.07
RPH3AQ9Y2J0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RPH3AQ9Y2J0 AC134407.2-201ENST00000625089 1978 ntBASIC14.58□□□□□ -0.07
RPH3AQ9Y2J0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RPH3AQ9Y2J0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPH3AQ9Y2J0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 TSPY16P-201ENST00000449843 468 ntBASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 TEX28P1-201ENST00000613479 1221 ntBASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 TEX28P2-201ENST00000617764 1221 ntBASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 AL691432.1-201ENST00000596308 1422 ntBASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.58□□□□□ -0.08
RPH3AQ9Y2J0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 OR8S1-201ENST00000310194 1080 ntBASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms