Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 AC018892.3-201ENST00000623986 2499 ntBASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 HIST3H2BA-201ENST00000436555 524 ntBASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 U91328.1-201ENST00000437528 223 ntBASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 AC017083.2-201ENST00000608069 979 ntBASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXD3Q9UJU5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 PHKG1P2-201ENST00000457537 863 ntBASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 AC090142.2-201ENST00000483263 416 ntBASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 AC104596.2-201ENST00000512793 793 ntBASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 CHCHD2P3-201ENST00000603038 451 ntBASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 AL450472.2-201ENST00000603663 1156 ntBASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 AL109936.8-201ENST00000641772 604 ntBASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms