Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 BCL2L12P1-201ENST00000508390 733 ntBASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 AC136759.1-202ENST00000530858 2194 ntBASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 AC009093.2-202ENST00000620513 2079 ntBASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 AC007952.4-201ENST00000573866 637 ntBASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 FKBP4P6-201ENST00000457486 1332 ntBASIC24.18■■□□□ 1.46
RIMBP3Q9UFD9 AL929302.1-201ENST00000426556 871 ntBASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 AL138781.2-201ENST00000617896 1843 ntBASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 RPL3P5-201ENST00000441645 1232 ntBASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 RNA5SP417-201ENST00000516459 108 ntBASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RIMBP3Q9UFD9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 AC004066.1-201ENST00000502488 802 ntBASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 USB1-205ENST00000561743 1135 ntTSL 3 BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RIMBP3Q9UFD9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RIMBP3Q9UFD9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms