Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 FO393414.2-201ENST00000405153 598 ntBASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 HLA-V-201ENST00000429037 534 ntBASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 AC093726.1-201ENST00000608064 963 ntBASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 AC017083.2-201ENST00000608069 979 ntBASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 AC074044.1-201ENST00000609673 707 ntBASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 KRT17P8-201ENST00000540749 863 ntBASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 AC126177.1-201ENST00000547829 2218 ntBASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDAC6Q9UBN7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms