Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FBXO28Q9NVF7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FBXO28Q9NVF7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FBXO28Q9NVF7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
FBXO28Q9NVF7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.04■□□□□ 0.48
FBXO28Q9NVF7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
FBXO28Q9NVF7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 AC022137.2-201ENST00000503482 481 ntBASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 AC093813.1-201ENST00000605066 256 ntBASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
FBXO28Q9NVF7 AC112504.1-201ENST00000623415 1841 ntBASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 MIR1908-201ENST00000410394 80 ntBASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 AC010491.1-201ENST00000563101 2797 ntBASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
FBXO28Q9NVF7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FBXO28Q9NVF7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
FBXO28Q9NVF7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FBXO28Q9NVF7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
FBXO28Q9NVF7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
FBXO28Q9NVF7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FBXO28Q9NVF7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FBXO28Q9NVF7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 AC024909.3-201ENST00000611513 2257 ntBASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FBXO28Q9NVF7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms