Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 RPSAP43-201ENST00000402237 625 ntBASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 RN7SL589P-201ENST00000481268 310 ntBASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 ALG1L5P-201ENST00000482043 771 ntBASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 RARRES2P8-201ENST00000566335 367 ntBASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 AC138035.3-201ENST00000622706 2791 ntBASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.21□□□□□ -0.3
LIN7CQ9NUP9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.21□□□□□ -0.3
LIN7CQ9NUP9 ELL2P1-201ENST00000413990 1906 ntBASIC13.21□□□□□ -0.3
LIN7CQ9NUP9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LIN7CQ9NUP9 WASH6P-202ENST00000359512 1437 ntBASIC13.21□□□□□ -0.3
LIN7CQ9NUP9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
LIN7CQ9NUP9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.21□□□□□ -0.3
LIN7CQ9NUP9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 AKAP8P1-201ENST00000434743 1349 ntBASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 AL355306.1-201ENST00000415580 579 ntBASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 YBX1P5-201ENST00000509441 847 ntBASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 AC099522.2-201ENST00000607001 744 ntBASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 AC092902.6-201ENST00000641783 218 ntBASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LIN7CQ9NUP9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms