Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 AC087481.3-201ENST00000602886 1894 ntBASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 AC138969.3-201ENST00000546612 1459 ntBASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 AC138932.2-201ENST00000548268 1459 ntBASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 AC126755.4-201ENST00000549796 1459 ntBASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 MEIS3P1-201ENST00000495167 958 ntBASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.18■□□□□ 0.66
ECHDC1Q9NTX5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 TMBIM7P-203ENST00000641617 1718 ntBASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 TSPY16P-201ENST00000449843 468 ntBASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 AC015910.1-201ENST00000579400 975 ntBASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC1Q9NTX5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms