Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM7Q9NR12 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 AC093433.1-201ENST00000458048 571 ntBASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 VDAC1P7-201ENST00000462417 847 ntBASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 AP001063.1-201ENST00000568332 529 ntBASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 GNRHR2-203ENST00000581100 1187 ntBASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM7Q9NR12 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 AC104306.2-201ENST00000451877 341 ntBASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 PCDHA1-201ENST00000378133 2726 ntBASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.5■□□□□ 0.39
PDLIM7Q9NR12 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 AL365203.3-201ENST00000609742 2057 ntBASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms