Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 AL139094.1-201ENST00000405549 1188 ntBASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 HIST2H2BC-201ENST00000498492 580 ntBASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDH11XQ9BZA7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 LRRC59-203ENST00000576448 1531 ntBASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 AC018695.7-201ENST00000624587 2492 ntBASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 AC079178.1-201ENST00000420915 656 ntBASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH11XQ9BZA7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 AC022188.1-201ENST00000620960 1664 ntBASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 AC069224.1-201ENST00000566372 1715 ntBASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 MTHFR-217ENST00000641820 1569 ntBASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 FNTAP2-201ENST00000430308 634 ntBASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 AC005077.2-201ENST00000449786 690 ntBASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH11XQ9BZA7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 AL596087.1-201ENST00000400979 1969 ntBASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 KRT8P14-201ENST00000414254 1442 ntBASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms