Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 KRT18P43-201ENST00000469825 1281 ntBASIC16.42■□□□□ 0.22
LRRC3Q9BY71 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 AL022328.1-201ENST00000610050 478 ntBASIC16.42■□□□□ 0.22
LRRC3Q9BY71 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 CICP6-201ENST00000457191 2729 ntBASIC16.42■□□□□ 0.22
LRRC3Q9BY71 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 MSTO2P-201ENST00000314835 1709 ntBASIC16.42■□□□□ 0.22
LRRC3Q9BY71 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC3Q9BY71 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 AC092933.1-201ENST00000393644 945 ntBASIC16.41■□□□□ 0.22
LRRC3Q9BY71 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 BCRP2-202ENST00000447763 634 ntBASIC16.41■□□□□ 0.22
LRRC3Q9BY71 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 CTBP2P5-201ENST00000454986 1264 ntBASIC16.41■□□□□ 0.22
LRRC3Q9BY71 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 BCRP6-201ENST00000510112 632 ntBASIC16.41■□□□□ 0.22
LRRC3Q9BY71 BCRP7-201ENST00000511549 544 ntBASIC16.41■□□□□ 0.22
LRRC3Q9BY71 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 AC026410.3-201ENST00000514280 936 ntBASIC16.41■□□□□ 0.22
LRRC3Q9BY71 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 MIR4313-201ENST00000580760 101 ntBASIC16.41■□□□□ 0.22
LRRC3Q9BY71 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 AL162727.3-201ENST00000635661 2787 ntBASIC16.41■□□□□ 0.22
LRRC3Q9BY71 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC3Q9BY71 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 CYP2T1P-202ENST00000641596 2535 ntBASIC16.4■□□□□ 0.22
LRRC3Q9BY71 DRD5P1-201ENST00000456605 1438 ntBASIC16.4■□□□□ 0.22
LRRC3Q9BY71 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 AC093433.1-201ENST00000458048 571 ntBASIC16.4■□□□□ 0.22
LRRC3Q9BY71 AC022494.1-201ENST00000466044 728 ntBASIC16.4■□□□□ 0.22
LRRC3Q9BY71 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 PTP4A1P2-201ENST00000546033 454 ntBASIC16.4■□□□□ 0.22
LRRC3Q9BY71 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC3Q9BY71 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms