Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 RCN1P1-201ENST00000400413 996 ntBASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AL035696.2-201ENST00000407941 709 ntBASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AC106795.1-205ENST00000512851 1056 ntBASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AC087641.1-201ENST00000557561 1021 ntBASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AC012615.1-201ENST00000565797 1299 ntBASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AL139288.1-201ENST00000623748 933 ntBASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AC066615.1-201ENST00000640911 628 ntBASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 AC112693.3-201ENST00000624819 1983 ntBASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSBP4Q9BWG4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 AC092127.1-201ENST00000567093 3455 ntBASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 AL591684.3-201ENST00000605187 298 ntBASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 AP001269.4-201ENST00000609611 512 ntBASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms