Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CCL13Q99616 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL13Q99616 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL13Q99616 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CCL13Q99616 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 HNRNPUP1-201ENST00000554987 333 ntBASIC13.26□□□□□ -0.29
CCL13Q99616 AC044860.1-202ENST00000559481 777 ntBASIC13.26□□□□□ -0.29
CCL13Q99616 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CCL13Q99616 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL13Q99616 MIR4313-201ENST00000580760 101 ntBASIC13.26□□□□□ -0.29
CCL13Q99616 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL13Q99616 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL13Q99616 AL109936.8-201ENST00000641772 604 ntBASIC13.26□□□□□ -0.29
CCL13Q99616 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CCL13Q99616 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL13Q99616 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL13Q99616 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL13Q99616 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CCL13Q99616 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 CICP13-201ENST00000422015 2789 ntBASIC13.25□□□□□ -0.29
CCL13Q99616 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL13Q99616 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.25□□□□□ -0.29
CCL13Q99616 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL13Q99616 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL13Q99616 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.25□□□□□ -0.29
CCL13Q99616 AC004890.2-204ENST00000481968 304 ntBASIC13.25□□□□□ -0.29
CCL13Q99616 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL13Q99616 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL13Q99616 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL13Q99616 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL13Q99616 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL13Q99616 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL13Q99616 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CCL13Q99616 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL13Q99616 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CCL13Q99616 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL13Q99616 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL13Q99616 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 AL607033.1-201ENST00000623900 1599 ntBASIC13.24□□□□□ -0.29
CCL13Q99616 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 AL139384.1-201ENST00000612143 3047 ntBASIC13.24□□□□□ -0.29
CCL13Q99616 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 MIR600HG-201ENST00000449175 5984 ntBASIC13.24□□□□□ -0.29
CCL13Q99616 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL13Q99616 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CCL13Q99616 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms