Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.6□□□□□ -0.55
MUC4Q99102 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.6□□□□□ -0.55
MUC4Q99102 AC093214.1-201ENST00000511688 1107 ntBASIC11.6□□□□□ -0.55
MUC4Q99102 AL138918.1-201ENST00000568306 659 ntBASIC11.6□□□□□ -0.55
MUC4Q99102 AP000842.3-202ENST00000569238 1080 ntBASIC11.6□□□□□ -0.55
MUC4Q99102 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
MUC4Q99102 MIR6752-201ENST00000618442 71 ntBASIC11.6□□□□□ -0.55
MUC4Q99102 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.6□□□□□ -0.55
MUC4Q99102 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
MUC4Q99102 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.6□□□□□ -0.55
MUC4Q99102 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MUC4Q99102 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.6□□□□□ -0.55
MUC4Q99102 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.6□□□□□ -0.55
MUC4Q99102 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
MUC4Q99102 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.6□□□□□ -0.55
MUC4Q99102 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.6□□□□□ -0.55
MUC4Q99102 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.6□□□□□ -0.55
MUC4Q99102 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.59□□□□□ -0.55
MUC4Q99102 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.59□□□□□ -0.55
MUC4Q99102 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 BNIP3P1-202ENST00000550043 1585 ntBASIC11.59□□□□□ -0.55
MUC4Q99102 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.59□□□□□ -0.55
MUC4Q99102 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.59□□□□□ -0.55
MUC4Q99102 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.59□□□□□ -0.55
MUC4Q99102 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.59□□□□□ -0.55
MUC4Q99102 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
MUC4Q99102 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.59□□□□□ -0.55
MUC4Q99102 ACTG1P14-201ENST00000446382 1122 ntBASIC11.59□□□□□ -0.55
MUC4Q99102 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
MUC4Q99102 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.59□□□□□ -0.55
MUC4Q99102 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.59□□□□□ -0.55
MUC4Q99102 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.59□□□□□ -0.55
MUC4Q99102 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.59□□□□□ -0.55
MUC4Q99102 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.59□□□□□ -0.55
MUC4Q99102 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
MUC4Q99102 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
MUC4Q99102 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 LINC00528-201ENST00000600723 2160 ntBASIC11.59□□□□□ -0.55
MUC4Q99102 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.59□□□□□ -0.55
MUC4Q99102 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 AL136982.4-201ENST00000437689 1740 ntBASIC11.59□□□□□ -0.55
MUC4Q99102 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MUC4Q99102 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
MUC4Q99102 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
MUC4Q99102 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MUC4Q99102 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms