Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AP000356.3-201ENST00000382243 753 ntBASIC16.79■□□□□ 0.28
ALPK3Q96L96 RN7SKP175-201ENST00000408472 289 ntBASIC16.79■□□□□ 0.28
ALPK3Q96L96 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 AP002803.1-201ENST00000528836 498 ntBASIC16.79■□□□□ 0.28
ALPK3Q96L96 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 AL136295.7-201ENST00000619226 1200 ntBASIC16.79■□□□□ 0.28
ALPK3Q96L96 AC005618.3-201ENST00000624928 458 ntBASIC16.79■□□□□ 0.28
ALPK3Q96L96 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 AC120498.9-201ENST00000339021 3867 ntBASIC16.78■□□□□ 0.28
ALPK3Q96L96 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 PCDHA12-202ENST00000613593 2588 ntBASIC16.78■□□□□ 0.28
ALPK3Q96L96 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 SAMD11P1-201ENST00000571429 661 ntBASIC16.78■□□□□ 0.28
ALPK3Q96L96 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ALPK3Q96L96 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALPK3Q96L96 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALPK3Q96L96 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALPK3Q96L96 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALPK3Q96L96 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALPK3Q96L96 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALPK3Q96L96 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 KRT8P21-201ENST00000430398 1491 ntBASIC16.77■□□□□ 0.28
ALPK3Q96L96 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALPK3Q96L96 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.77■□□□□ 0.28
ALPK3Q96L96 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ALPK3Q96L96 AL008718.2-201ENST00000609206 1313 ntBASIC16.77■□□□□ 0.27
ALPK3Q96L96 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.77■□□□□ 0.27
ALPK3Q96L96 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALPK3Q96L96 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.77■□□□□ 0.27
ALPK3Q96L96 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
ALPK3Q96L96 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ALPK3Q96L96 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.76■□□□□ 0.27
ALPK3Q96L96 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALPK3Q96L96 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALPK3Q96L96 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALPK3Q96L96 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALPK3Q96L96 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.76■□□□□ 0.27
ALPK3Q96L96 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALPK3Q96L96 AC012362.1-201ENST00000434906 739 ntBASIC16.76■□□□□ 0.27
ALPK3Q96L96 AC079112.1-201ENST00000454972 939 ntBASIC16.76■□□□□ 0.27
ALPK3Q96L96 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
ALPK3Q96L96 AP003392.6-201ENST00000607709 325 ntBASIC16.76■□□□□ 0.27
ALPK3Q96L96 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALPK3Q96L96 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.76■□□□□ 0.27
ALPK3Q96L96 AC141586.5-201ENST00000624546 2050 ntBASIC16.76■□□□□ 0.27
ALPK3Q96L96 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms