Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC138761.1-201ENST00000584393 385 ntBASIC16.37■□□□□ 0.21
IFT43Q96FT9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 RARRES2P9-201ENST00000565168 469 ntBASIC16.36■□□□□ 0.21
IFT43Q96FT9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 FO538757.1-201ENST00000623083 1397 ntBASIC16.36■□□□□ 0.21
IFT43Q96FT9 CDC14C-201ENST00000428251 1719 ntBASIC16.36■□□□□ 0.21
IFT43Q96FT9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 LINC02447-202ENST00000501888 2146 ntBASIC16.36■□□□□ 0.21
IFT43Q96FT9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT43Q96FT9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.36■□□□□ 0.21
IFT43Q96FT9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 FAM207CP-201ENST00000443486 507 ntBASIC16.35■□□□□ 0.21
IFT43Q96FT9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 AC190387.1-201ENST00000551683 408 ntBASIC16.35■□□□□ 0.21
IFT43Q96FT9 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 AL009178.2-201ENST00000597278 2719 ntBASIC16.35■□□□□ 0.21
IFT43Q96FT9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms