Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 AL645608.8-201ENST00000606034 2086 ntBASIC18.21■□□□□ 0.51
CDCA5Q96FF9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 AC007274.2-201ENST00000421675 662 ntBASIC18.21■□□□□ 0.51
CDCA5Q96FF9 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 HIST2H2BB-201ENST00000449108 381 ntBASIC18.21■□□□□ 0.51
CDCA5Q96FF9 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA5Q96FF9 ME2P1-201ENST00000426028 1970 ntBASIC18.21■□□□□ 0.5
CDCA5Q96FF9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 KRT8P4-201ENST00000509735 1454 ntBASIC18.2■□□□□ 0.5
CDCA5Q96FF9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 AP003171.2-201ENST00000528208 925 ntBASIC18.2■□□□□ 0.5
CDCA5Q96FF9 AC025181.2-201ENST00000606994 802 ntBASIC18.2■□□□□ 0.5
CDCA5Q96FF9 ZACNP1-201ENST00000612259 710 ntBASIC18.2■□□□□ 0.5
CDCA5Q96FF9 AP003419.4-201ENST00000616071 517 ntBASIC18.2■□□□□ 0.5
CDCA5Q96FF9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA5Q96FF9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AL139094.1-201ENST00000405549 1188 ntBASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AL354877.1-201ENST00000424412 413 ntBASIC18.19■□□□□ 0.5
CDCA5Q96FF9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDCA5Q96FF9 AP000346.4-201ENST00000614827 381 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms