Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 AC245100.5-201ENST00000452108 331 ntBASIC18.81■□□□□ 0.6
DDX11Q96FC9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DDX11Q96FC9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 AC073347.1-201ENST00000421633 2643 ntBASIC18.81■□□□□ 0.6
DDX11Q96FC9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX11Q96FC9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 GAPDHP21-201ENST00000450301 1010 ntBASIC18.8■□□□□ 0.6
DDX11Q96FC9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 AC105021.1-202ENST00000570572 669 ntBASIC18.8■□□□□ 0.6
DDX11Q96FC9 AC061975.2-201ENST00000581722 295 ntBASIC18.8■□□□□ 0.6
DDX11Q96FC9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 AL662799.1-202ENST00000614205 422 ntBASIC18.8■□□□□ 0.6
DDX11Q96FC9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX11Q96FC9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX11Q96FC9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 AC087499.5-201ENST00000452760 1342 ntBASIC18.79■□□□□ 0.6
DDX11Q96FC9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 TEX28P1-201ENST00000613479 1221 ntBASIC18.79■□□□□ 0.6
DDX11Q96FC9 TEX28P2-201ENST00000617764 1221 ntBASIC18.79■□□□□ 0.6
DDX11Q96FC9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 AC018892.3-201ENST00000623986 2499 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms