Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 AC107918.4-202ENST00000641623 219 ntBASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 WASH3P-207ENST00000560956 1394 ntBASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 FO538757.1-201ENST00000623083 1397 ntBASIC15.75■□□□□ 0.11
CKAP2Q8WWK9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 BEND3P1-201ENST00000421591 1944 ntBASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 KRT18P31-201ENST00000506277 1292 ntBASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 AL137784.3-201ENST00000623858 2288 ntBASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKAP2Q8WWK9 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 ACE3P-201ENST00000423435 1973 ntBASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 AC136632.2-201ENST00000512891 861 ntBASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 AC243562.2-201ENST00000561247 970 ntBASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 AL031432.2-201ENST00000566714 459 ntBASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 AL928711.1-201ENST00000570165 459 ntBASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 AL645728.2-201ENST00000641974 660 ntBASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 AL691432.1-201ENST00000596308 1422 ntBASIC15.73■□□□□ 0.11
CKAP2Q8WWK9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms