Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 AC063926.3-201ENST00000624734 5658 ntBASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 SNX18-202ENST00000343017 3140 ntBASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 AL139010.1-201ENST00000454878 894 ntBASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 AL135744.1-201ENST00000565098 629 ntBASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 AJ011931.1-201ENST00000618749 2492 ntBASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC44A1Q8WWI5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 AC007191.1-201ENST00000623179 2995 ntBASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 AC005089.1-201ENST00000619486 2241 ntBASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 TFAMP1-201ENST00000412727 736 ntBASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 AL355306.1-201ENST00000415580 579 ntBASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms