Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNED1Q8TER0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.89■□□□□ 0.62
SNED1Q8TER0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNED1Q8TER0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNED1Q8TER0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNED1Q8TER0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 MIR648-201ENST00000385046 94 ntBASIC18.89■□□□□ 0.61
SNED1Q8TER0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNED1Q8TER0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 AC114812.1-204ENST00000449669 728 ntBASIC18.89■□□□□ 0.61
SNED1Q8TER0 MPRIPP1-201ENST00000452433 1089 ntBASIC18.89■□□□□ 0.61
SNED1Q8TER0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 AC022748.3-201ENST00000621828 275 ntBASIC18.89■□□□□ 0.61
SNED1Q8TER0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNED1Q8TER0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
SNED1Q8TER0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 AC092364.2-201ENST00000596710 2692 ntBASIC18.88■□□□□ 0.61
SNED1Q8TER0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 AL139094.1-201ENST00000405549 1188 ntBASIC18.88■□□□□ 0.61
SNED1Q8TER0 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.88■□□□□ 0.61
SNED1Q8TER0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 FTLP10-202ENST00000505798 471 ntBASIC18.88■□□□□ 0.61
SNED1Q8TER0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 PPY2P-201ENST00000582808 702 ntBASIC18.88■□□□□ 0.61
SNED1Q8TER0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 AC025181.2-201ENST00000606994 802 ntBASIC18.88■□□□□ 0.61
SNED1Q8TER0 AC244157.2-201ENST00000616239 1006 ntBASIC18.88■□□□□ 0.61
SNED1Q8TER0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNED1Q8TER0 KRT8P14-201ENST00000414254 1442 ntBASIC18.88■□□□□ 0.61
SNED1Q8TER0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.88■□□□□ 0.61
SNED1Q8TER0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 AL354877.1-201ENST00000424412 413 ntBASIC18.87■□□□□ 0.61
SNED1Q8TER0 RN7SL720P-201ENST00000488178 304 ntBASIC18.87■□□□□ 0.61
SNED1Q8TER0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 RN7SL713P-201ENST00000582127 302 ntBASIC18.87■□□□□ 0.61
SNED1Q8TER0 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 AF254983.2-201ENST00000612331 135 ntBASIC18.87■□□□□ 0.61
SNED1Q8TER0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms