Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF2Q8N5M1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
ATPAF2Q8N5M1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF2Q8N5M1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF2Q8N5M1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.22■□□□□ 0.19
ATPAF2Q8N5M1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ATPAF2Q8N5M1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF2Q8N5M1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF2Q8N5M1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.22■□□□□ 0.19
ATPAF2Q8N5M1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 RFPL4AP1-201ENST00000530883 850 ntBASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 AL390754.1-201ENST00000619088 582 ntBASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 HYMAI-201ENST00000635591 3347 ntBASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ATPAF2Q8N5M1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATPAF2Q8N5M1 AL139384.1-201ENST00000612143 3047 ntBASIC16.21■□□□□ 0.18
ATPAF2Q8N5M1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATPAF2Q8N5M1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATPAF2Q8N5M1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.21■□□□□ 0.18
ATPAF2Q8N5M1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATPAF2Q8N5M1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 TARDBPP1-201ENST00000442013 1203 ntBASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 AC010336.2-201ENST00000564226 506 ntBASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.2■□□□□ 0.18
ATPAF2Q8N5M1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ATPAF2Q8N5M1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms