Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFWD3Q6PCD5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 SPDYE18-201ENST00000510091 1050 ntBASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 AC009118.2-201ENST00000613275 655 ntBASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.51■□□□□ 0.23
RFWD3Q6PCD5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 ZNF890P-202ENST00000530367 1156 ntBASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 AC104794.3-201ENST00000566840 1248 ntBASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.5■□□□□ 0.23
RFWD3Q6PCD5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 AP001282.1-201ENST00000531301 1499 ntBASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms