Protein–RNA interactions for Protein: Q5EBN2

TRIM61, Putative tripartite motif-containing protein 61, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM61Q5EBN2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 AL138799.1-201ENST00000448213 1675 ntBASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM61Q5EBN2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 AC020916.1-201ENST00000587762 1774 ntBASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 HINT2P1-201ENST00000419438 481 ntBASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 NDUFV2P1-201ENST00000596415 907 ntBASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 ECM1P1-201ENST00000604092 1279 ntBASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM61Q5EBN2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIM61Q5EBN2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM61Q5EBN2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM61Q5EBN2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms