Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CDK5Q00535 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 FAM220BP-201ENST00000377689 816 ntBASIC14.28□□□□□ -0.12
CDK5Q00535 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.28□□□□□ -0.12
CDK5Q00535 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CDK5Q00535 FAAHP1-202ENST00000446499 1238 ntBASIC14.28□□□□□ -0.12
CDK5Q00535 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK5Q00535 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDK5Q00535 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK5Q00535 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK5Q00535 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.28□□□□□ -0.12
CDK5Q00535 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK5Q00535 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 AP001005.1-201ENST00000571755 1248 ntBASIC14.28□□□□□ -0.12
CDK5Q00535 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDK5Q00535 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.28□□□□□ -0.12
CDK5Q00535 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.28□□□□□ -0.12
CDK5Q00535 RN7SL510P-201ENST00000581311 263 ntBASIC14.28□□□□□ -0.12
CDK5Q00535 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDK5Q00535 CYP4F24P-201ENST00000586049 1580 ntBASIC14.28□□□□□ -0.12
CDK5Q00535 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDK5Q00535 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.28□□□□□ -0.12
CDK5Q00535 AC064836.3-201ENST00000607928 673 ntBASIC14.28□□□□□ -0.12
CDK5Q00535 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.28□□□□□ -0.12
CDK5Q00535 AC063926.3-201ENST00000624734 5658 ntBASIC14.28□□□□□ -0.12
CDK5Q00535 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
CDK5Q00535 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK5Q00535 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.28□□□□□ -0.12
CDK5Q00535 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK5Q00535 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
CDK5Q00535 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDK5Q00535 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK5Q00535 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK5Q00535 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CDK5Q00535 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CDK5Q00535 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK5Q00535 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK5Q00535 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.27□□□□□ -0.12
CDK5Q00535 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK5Q00535 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CDK5Q00535 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.27□□□□□ -0.12
CDK5Q00535 AKAP8P1-201ENST00000434743 1349 ntBASIC14.27□□□□□ -0.12
CDK5Q00535 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 AC004870.1-201ENST00000315132 882 ntBASIC14.27□□□□□ -0.13
CDK5Q00535 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CDK5Q00535 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CDK5Q00535 AC142381.1-201ENST00000426099 345 ntBASIC14.27□□□□□ -0.13
CDK5Q00535 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.27□□□□□ -0.13
CDK5Q00535 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.27□□□□□ -0.13
CDK5Q00535 RNA5SP410-201ENST00000516285 106 ntBASIC14.27□□□□□ -0.13
CDK5Q00535 AC112191.1-201ENST00000523689 701 ntBASIC14.27□□□□□ -0.13
CDK5Q00535 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.27□□□□□ -0.13
CDK5Q00535 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.27□□□□□ -0.13
CDK5Q00535 HNRNPUP1-201ENST00000554987 333 ntBASIC14.27□□□□□ -0.13
CDK5Q00535 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.27□□□□□ -0.13
CDK5Q00535 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.27□□□□□ -0.13
CDK5Q00535 AC008267.7-201ENST00000624570 1194 ntBASIC14.27□□□□□ -0.13
CDK5Q00535 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.27□□□□□ -0.13
CDK5Q00535 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CDK5Q00535 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.27□□□□□ -0.13
CDK5Q00535 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.27□□□□□ -0.13
CDK5Q00535 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDK5Q00535 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK5Q00535 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CDK5Q00535 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK5Q00535 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.26□□□□□ -0.13
CDK5Q00535 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDK5Q00535 AC005912.2-201ENST00000619492 2400 ntBASIC14.26□□□□□ -0.13
CDK5Q00535 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK5Q00535 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK5Q00535 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK5Q00535 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.26□□□□□ -0.13
CDK5Q00535 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.26□□□□□ -0.13
CDK5Q00535 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK5Q00535 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.26□□□□□ -0.13
CDK5Q00535 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CDK5Q00535 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK5Q00535 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK5Q00535 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms