Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.55■□□□□ 0.24
IRX4P78413 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.55■□□□□ 0.24
IRX4P78413 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.55■□□□□ 0.24
IRX4P78413 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.55■□□□□ 0.24
IRX4P78413 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.55■□□□□ 0.24
IRX4P78413 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 AL138918.1-201ENST00000568306 659 ntBASIC16.55■□□□□ 0.24
IRX4P78413 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.55■□□□□ 0.24
IRX4P78413 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.55■□□□□ 0.24
IRX4P78413 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
IRX4P78413 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 AL161772.1-201ENST00000610494 4412 ntBASIC16.55■□□□□ 0.24
IRX4P78413 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
IRX4P78413 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
IRX4P78413 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
IRX4P78413 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.55■□□□□ 0.24
IRX4P78413 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
IRX4P78413 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.54■□□□□ 0.24
IRX4P78413 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.54■□□□□ 0.24
IRX4P78413 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.54■□□□□ 0.24
IRX4P78413 RNU1-129P-201ENST00000384064 167 ntBASIC16.54■□□□□ 0.24
IRX4P78413 ARSEP1-201ENST00000420443 635 ntBASIC16.54■□□□□ 0.24
IRX4P78413 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.54■□□□□ 0.24
IRX4P78413 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IRX4P78413 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.54■□□□□ 0.24
IRX4P78413 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IRX4P78413 U1.21-201ENST00000580816 167 ntBASIC16.54■□□□□ 0.24
IRX4P78413 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.54■□□□□ 0.24
IRX4P78413 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.54■□□□□ 0.24
IRX4P78413 AL031055.1-201ENST00000606362 631 ntBASIC16.54■□□□□ 0.24
IRX4P78413 AC003101.2-201ENST00000612557 442 ntBASIC16.54■□□□□ 0.24
IRX4P78413 AC018529.1-201ENST00000613063 361 ntBASIC16.54■□□□□ 0.24
IRX4P78413 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
IRX4P78413 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.54■□□□□ 0.24
IRX4P78413 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.54■□□□□ 0.24
IRX4P78413 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.54■□□□□ 0.24
IRX4P78413 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.54■□□□□ 0.24
IRX4P78413 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
IRX4P78413 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.54■□□□□ 0.24
IRX4P78413 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.54■□□□□ 0.24
IRX4P78413 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IRX4P78413 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.53■□□□□ 0.24
IRX4P78413 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.53■□□□□ 0.24
IRX4P78413 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.53■□□□□ 0.24
IRX4P78413 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.53■□□□□ 0.24
IRX4P78413 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.53■□□□□ 0.24
IRX4P78413 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.53■□□□□ 0.24
IRX4P78413 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
IRX4P78413 HCG4-201ENST00000418983 998 ntBASIC16.53■□□□□ 0.24
IRX4P78413 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.53■□□□□ 0.24
IRX4P78413 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.53■□□□□ 0.24
IRX4P78413 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.53■□□□□ 0.24
IRX4P78413 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.53■□□□□ 0.24
IRX4P78413 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
IRX4P78413 MPDU1-223ENST00000582151 728 ntBASIC16.53■□□□□ 0.24
IRX4P78413 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.53■□□□□ 0.24
IRX4P78413 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.53■□□□□ 0.24
IRX4P78413 AL138828.2-201ENST00000615812 383 ntBASIC16.53■□□□□ 0.24
IRX4P78413 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.53■□□□□ 0.24
IRX4P78413 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms