Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 AC009090.5-201ENST00000624886 2285 ntBASIC17.1■□□□□ 0.33
SNRPFP62306 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.1■□□□□ 0.33
SNRPFP62306 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SNRPFP62306 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SNRPFP62306 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRPFP62306 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRPFP62306 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SNRPFP62306 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SNRPFP62306 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.1■□□□□ 0.33
SNRPFP62306 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.1■□□□□ 0.33
SNRPFP62306 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.1■□□□□ 0.33
SNRPFP62306 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.1■□□□□ 0.33
SNRPFP62306 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.1■□□□□ 0.33
SNRPFP62306 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.1■□□□□ 0.33
SNRPFP62306 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRPFP62306 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRPFP62306 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRPFP62306 AL391069.4-201ENST00000609583 481 ntBASIC17.1■□□□□ 0.33
SNRPFP62306 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SNRPFP62306 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.1■□□□□ 0.33
SNRPFP62306 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
SNRPFP62306 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRPFP62306 AC126365.1-201ENST00000578585 1514 ntBASIC17.1■□□□□ 0.33
SNRPFP62306 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRPFP62306 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRPFP62306 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.1■□□□□ 0.33
SNRPFP62306 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SNRPFP62306 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.09■□□□□ 0.33
SNRPFP62306 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.09■□□□□ 0.33
SNRPFP62306 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.09■□□□□ 0.33
SNRPFP62306 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.09■□□□□ 0.33
SNRPFP62306 AC092384.3-202ENST00000564646 2873 ntBASIC17.09■□□□□ 0.33
SNRPFP62306 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNRPFP62306 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SNRPFP62306 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.09■□□□□ 0.33
SNRPFP62306 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.09■□□□□ 0.33
SNRPFP62306 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.09■□□□□ 0.33
SNRPFP62306 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.09■□□□□ 0.33
SNRPFP62306 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.09■□□□□ 0.33
SNRPFP62306 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.09■□□□□ 0.33
SNRPFP62306 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SNRPFP62306 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
SNRPFP62306 RRP7BP-205ENST00000566851 833 ntBASIC17.09■□□□□ 0.33
SNRPFP62306 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.09■□□□□ 0.33
SNRPFP62306 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.09■□□□□ 0.33
SNRPFP62306 AC009118.2-201ENST00000613275 655 ntBASIC17.09■□□□□ 0.33
SNRPFP62306 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.09■□□□□ 0.33
SNRPFP62306 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.09■□□□□ 0.33
SNRPFP62306 AC112693.3-201ENST00000624819 1983 ntBASIC17.09■□□□□ 0.33
SNRPFP62306 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.09■□□□□ 0.33
SNRPFP62306 AC126177.1-201ENST00000547829 2218 ntBASIC17.09■□□□□ 0.33
SNRPFP62306 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.09■□□□□ 0.33
SNRPFP62306 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.09■□□□□ 0.33
SNRPFP62306 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SNRPFP62306 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRPFP62306 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SNRPFP62306 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNRPFP62306 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SNRPFP62306 AL162727.3-201ENST00000635661 2787 ntBASIC17.08■□□□□ 0.33
SNRPFP62306 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SNRPFP62306 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNRPFP62306 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.08■□□□□ 0.33
SNRPFP62306 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SNRPFP62306 AC104640.1-201ENST00000562617 2109 ntBASIC17.08■□□□□ 0.33
SNRPFP62306 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SNRPFP62306 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.08■□□□□ 0.33
SNRPFP62306 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 KRT8P44-201ENST00000441609 1350 ntBASIC17.08■□□□□ 0.32
SNRPFP62306 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.08■□□□□ 0.32
SNRPFP62306 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.08■□□□□ 0.32
SNRPFP62306 RARRES2P5-201ENST00000564013 466 ntBASIC17.08■□□□□ 0.32
SNRPFP62306 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.08■□□□□ 0.32
SNRPFP62306 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms