Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LIMK2P53671 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.97■□□□□ 0.15
LIMK2P53671 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.97■□□□□ 0.15
LIMK2P53671 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.97■□□□□ 0.15
LIMK2P53671 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.97■□□□□ 0.15
LIMK2P53671 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.97■□□□□ 0.15
LIMK2P53671 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.97■□□□□ 0.15
LIMK2P53671 IGHV3-42-201ENST00000520410 361 ntBASIC15.97■□□□□ 0.15
LIMK2P53671 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
LIMK2P53671 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.97■□□□□ 0.15
LIMK2P53671 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.97■□□□□ 0.15
LIMK2P53671 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.97■□□□□ 0.15
LIMK2P53671 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.97■□□□□ 0.15
LIMK2P53671 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 AC018892.3-201ENST00000623986 2499 ntBASIC15.97■□□□□ 0.15
LIMK2P53671 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.97■□□□□ 0.15
LIMK2P53671 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.97■□□□□ 0.15
LIMK2P53671 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LIMK2P53671 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LIMK2P53671 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.96■□□□□ 0.15
LIMK2P53671 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
LIMK2P53671 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.96■□□□□ 0.15
LIMK2P53671 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.96■□□□□ 0.15
LIMK2P53671 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.96■□□□□ 0.15
LIMK2P53671 AC142381.1-201ENST00000426099 345 ntBASIC15.96■□□□□ 0.15
LIMK2P53671 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.96■□□□□ 0.15
LIMK2P53671 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.96■□□□□ 0.15
LIMK2P53671 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.96■□□□□ 0.15
LIMK2P53671 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.96■□□□□ 0.15
LIMK2P53671 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
LIMK2P53671 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIMK2P53671 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.96■□□□□ 0.15
LIMK2P53671 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.96■□□□□ 0.15
LIMK2P53671 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
LIMK2P53671 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LIMK2P53671 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
LIMK2P53671 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LIMK2P53671 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LIMK2P53671 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.95■□□□□ 0.14
LIMK2P53671 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 REXO1L1P-202ENST00000608646 1974 ntBASIC15.95■□□□□ 0.14
LIMK2P53671 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 MST1L-201ENST00000442552 2185 ntBASIC15.95■□□□□ 0.14
LIMK2P53671 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LIMK2P53671 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LIMK2P53671 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.95■□□□□ 0.14
LIMK2P53671 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms