Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AL451007.2-201ENST00000632004 563 ntBASIC17.43■□□□□ 0.38
LBX1P52954 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC17.43■□□□□ 0.38
LBX1P52954 AL138688.1-201ENST00000624851 1594 ntBASIC17.43■□□□□ 0.38
LBX1P52954 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LBX1P52954 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.43■□□□□ 0.38
LBX1P52954 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.43■□□□□ 0.38
LBX1P52954 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LBX1P52954 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.42■□□□□ 0.38
LBX1P52954 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 AC134407.2-201ENST00000625089 1978 ntBASIC17.42■□□□□ 0.38
LBX1P52954 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.42■□□□□ 0.38
LBX1P52954 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LBX1P52954 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.42■□□□□ 0.38
LBX1P52954 VDAC1P1-201ENST00000439229 848 ntBASIC17.42■□□□□ 0.38
LBX1P52954 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LBX1P52954 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.42■□□□□ 0.38
LBX1P52954 MIR4683-201ENST00000579659 81 ntBASIC17.42■□□□□ 0.38
LBX1P52954 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.42■□□□□ 0.38
LBX1P52954 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.42■□□□□ 0.38
LBX1P52954 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.42■□□□□ 0.38
LBX1P52954 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.42■□□□□ 0.38
LBX1P52954 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LBX1P52954 KRT8P21-201ENST00000430398 1491 ntBASIC17.42■□□□□ 0.38
LBX1P52954 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.42■□□□□ 0.38
LBX1P52954 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LBX1P52954 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.42■□□□□ 0.38
LBX1P52954 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LBX1P52954 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LBX1P52954 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.41■□□□□ 0.38
LBX1P52954 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.41■□□□□ 0.38
LBX1P52954 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.41■□□□□ 0.38
LBX1P52954 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.41■□□□□ 0.38
LBX1P52954 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LBX1P52954 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.41■□□□□ 0.38
LBX1P52954 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.41■□□□□ 0.38
LBX1P52954 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.41■□□□□ 0.38
LBX1P52954 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.41■□□□□ 0.38
LBX1P52954 CR383656.3-201ENST00000551315 183 ntBASIC17.41■□□□□ 0.38
LBX1P52954 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.41■□□□□ 0.38
LBX1P52954 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.41■□□□□ 0.38
LBX1P52954 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.41■□□□□ 0.38
LBX1P52954 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.41■□□□□ 0.38
LBX1P52954 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LBX1P52954 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LBX1P52954 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
LBX1P52954 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LBX1P52954 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.4■□□□□ 0.38
LBX1P52954 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LBX1P52954 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.4■□□□□ 0.38
LBX1P52954 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LBX1P52954 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.4■□□□□ 0.38
LBX1P52954 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LBX1P52954 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.4■□□□□ 0.38
LBX1P52954 RN7SL470P-201ENST00000583069 259 ntBASIC17.4■□□□□ 0.38
LBX1P52954 AC006548.2-201ENST00000605217 529 ntBASIC17.4■□□□□ 0.38
LBX1P52954 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.4■□□□□ 0.38
LBX1P52954 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.4■□□□□ 0.38
LBX1P52954 MEG3_2.1-201ENST00000611456 105 ntBASIC17.4■□□□□ 0.38
LBX1P52954 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms