Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6CP51160 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6CP51160 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6CP51160 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6CP51160 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PDE6CP51160 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6CP51160 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PDE6CP51160 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.13■□□□□ 0.33
PDE6CP51160 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PDE6CP51160 AL136982.4-201ENST00000437689 1740 ntBASIC17.13■□□□□ 0.33
PDE6CP51160 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PDE6CP51160 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PDE6CP51160 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6CP51160 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PDE6CP51160 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PDE6CP51160 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6CP51160 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.12■□□□□ 0.33
PDE6CP51160 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.12■□□□□ 0.33
PDE6CP51160 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PDE6CP51160 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.12■□□□□ 0.33
PDE6CP51160 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDE6CP51160 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6CP51160 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6CP51160 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6CP51160 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6CP51160 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6CP51160 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.12■□□□□ 0.33
PDE6CP51160 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PDE6CP51160 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDE6CP51160 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6CP51160 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PDE6CP51160 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PDE6CP51160 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
PDE6CP51160 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 REXO1L1P-202ENST00000608646 1974 ntBASIC17.11■□□□□ 0.33
PDE6CP51160 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 CYP4F24P-201ENST00000586049 1580 ntBASIC17.11■□□□□ 0.33
PDE6CP51160 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.11■□□□□ 0.33
PDE6CP51160 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 CICP13-201ENST00000422015 2789 ntBASIC17.11■□□□□ 0.33
PDE6CP51160 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PDE6CP51160 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.11■□□□□ 0.33
PDE6CP51160 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.11■□□□□ 0.33
PDE6CP51160 FAM207CP-201ENST00000443486 507 ntBASIC17.11■□□□□ 0.33
PDE6CP51160 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.11■□□□□ 0.33
PDE6CP51160 HLA-V-204ENST00000476601 1289 ntBASIC17.11■□□□□ 0.33
PDE6CP51160 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6CP51160 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.11■□□□□ 0.33
PDE6CP51160 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6CP51160 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.11■□□□□ 0.33
PDE6CP51160 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.11■□□□□ 0.33
PDE6CP51160 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.11■□□□□ 0.33
PDE6CP51160 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.11■□□□□ 0.33
PDE6CP51160 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6CP51160 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.11■□□□□ 0.33
PDE6CP51160 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6CP51160 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.1■□□□□ 0.33
PDE6CP51160 AC067930.6-201ENST00000623257 4947 ntBASIC17.1■□□□□ 0.33
PDE6CP51160 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms