Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC012085.1-201ENST00000548270 765 ntBASIC17.36■□□□□ 0.37
CPT1AP50416 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.36■□□□□ 0.37
CPT1AP50416 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.36■□□□□ 0.37
CPT1AP50416 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.36■□□□□ 0.37
CPT1AP50416 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.36■□□□□ 0.37
CPT1AP50416 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CPT1AP50416 AHCYP2-201ENST00000430630 1300 ntBASIC17.36■□□□□ 0.37
CPT1AP50416 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CPT1AP50416 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CPT1AP50416 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.36■□□□□ 0.37
CPT1AP50416 AL138709.1-201ENST00000614840 1693 ntBASIC17.36■□□□□ 0.37
CPT1AP50416 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CPT1AP50416 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
CPT1AP50416 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.35■□□□□ 0.37
CPT1AP50416 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CPT1AP50416 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.35■□□□□ 0.37
CPT1AP50416 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.35■□□□□ 0.37
CPT1AP50416 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
CPT1AP50416 GPAA1P2-201ENST00000417923 928 ntBASIC17.35■□□□□ 0.37
CPT1AP50416 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 Z93015.1-201ENST00000451718 390 ntBASIC17.35■□□□□ 0.37
CPT1AP50416 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.35■□□□□ 0.37
CPT1AP50416 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.35■□□□□ 0.37
CPT1AP50416 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.35■□□□□ 0.37
CPT1AP50416 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.35■□□□□ 0.37
CPT1AP50416 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.35■□□□□ 0.37
CPT1AP50416 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CPT1AP50416 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CPT1AP50416 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.35■□□□□ 0.37
CPT1AP50416 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.35■□□□□ 0.37
CPT1AP50416 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CPT1AP50416 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPT1AP50416 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.34■□□□□ 0.37
CPT1AP50416 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.34■□□□□ 0.37
CPT1AP50416 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.34■□□□□ 0.37
CPT1AP50416 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.34■□□□□ 0.37
CPT1AP50416 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.34■□□□□ 0.37
CPT1AP50416 RNA5SP486-201ENST00000515961 83 ntBASIC17.34■□□□□ 0.37
CPT1AP50416 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.34■□□□□ 0.37
CPT1AP50416 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.34■□□□□ 0.37
CPT1AP50416 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.34■□□□□ 0.37
CPT1AP50416 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.34■□□□□ 0.37
CPT1AP50416 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.34■□□□□ 0.37
CPT1AP50416 MIR3615-201ENST00000581999 87 ntBASIC17.34■□□□□ 0.37
CPT1AP50416 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.34■□□□□ 0.37
CPT1AP50416 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.34■□□□□ 0.37
CPT1AP50416 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CPT1AP50416 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPT1AP50416 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.34■□□□□ 0.37
CPT1AP50416 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPT1AP50416 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPT1AP50416 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPT1AP50416 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPT1AP50416 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.33■□□□□ 0.37
CPT1AP50416 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPT1AP50416 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPT1AP50416 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms