Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 AC012362.1-201ENST00000434906 739 ntBASIC17.46■□□□□ 0.39
CENPFP49454 RPL17P45-201ENST00000586289 509 ntBASIC17.46■□□□□ 0.39
CENPFP49454 AC148477.9-201ENST00000623974 539 ntBASIC17.46■□□□□ 0.39
CENPFP49454 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CENPFP49454 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.46■□□□□ 0.39
CENPFP49454 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.46■□□□□ 0.39
CENPFP49454 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CENPFP49454 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CENPFP49454 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.45■□□□□ 0.38
CENPFP49454 AP001582.1-201ENST00000525856 295 ntBASIC17.45■□□□□ 0.38
CENPFP49454 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CENPFP49454 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.45■□□□□ 0.38
CENPFP49454 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.45■□□□□ 0.38
CENPFP49454 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CENPFP49454 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 DNM1P30-201ENST00000563586 452 ntBASIC17.45■□□□□ 0.38
CENPFP49454 AL157414.3-201ENST00000624276 1954 ntBASIC17.45■□□□□ 0.38
CENPFP49454 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.45■□□□□ 0.38
CENPFP49454 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CENPFP49454 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.45■□□□□ 0.38
CENPFP49454 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CENPFP49454 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.45■□□□□ 0.38
CENPFP49454 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.45■□□□□ 0.38
CENPFP49454 AC138894.2-201ENST00000602838 371 ntBASIC17.45■□□□□ 0.38
CENPFP49454 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.45■□□□□ 0.38
CENPFP49454 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CENPFP49454 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPFP49454 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CENPFP49454 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CENPFP49454 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CENPFP49454 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CENPFP49454 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CENPFP49454 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPFP49454 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.44■□□□□ 0.38
CENPFP49454 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.44■□□□□ 0.38
CENPFP49454 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPFP49454 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.44■□□□□ 0.38
CENPFP49454 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPFP49454 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.44■□□□□ 0.38
CENPFP49454 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPFP49454 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CENPFP49454 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPFP49454 AL161670.2-201ENST00000557650 1227 ntBASIC17.44■□□□□ 0.38
CENPFP49454 AC243562.2-201ENST00000561247 970 ntBASIC17.44■□□□□ 0.38
CENPFP49454 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.44■□□□□ 0.38
CENPFP49454 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPFP49454 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CENPFP49454 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPFP49454 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPFP49454 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CENPFP49454 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPFP49454 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPFP49454 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.43■□□□□ 0.38
CENPFP49454 AC127024.7-201ENST00000625101 200 ntBASIC17.43■□□□□ 0.38
CENPFP49454 ME2P1-201ENST00000426028 1970 ntBASIC17.43■□□□□ 0.38
CENPFP49454 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CENPFP49454 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CENPFP49454 KLF2P2-201ENST00000416807 1039 ntBASIC17.43■□□□□ 0.38
CENPFP49454 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms