Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
NEDD4P46934 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.53■□□□□ 0.56
NEDD4P46934 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.53■□□□□ 0.56
NEDD4P46934 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.52■□□□□ 0.56
NEDD4P46934 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NEDD4P46934 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.52■□□□□ 0.56
NEDD4P46934 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.52■□□□□ 0.56
NEDD4P46934 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 AC098850.1-201ENST00000419919 790 ntBASIC18.52■□□□□ 0.56
NEDD4P46934 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.52■□□□□ 0.56
NEDD4P46934 DFFBP1-201ENST00000433250 979 ntBASIC18.52■□□□□ 0.56
NEDD4P46934 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.52■□□□□ 0.56
NEDD4P46934 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.52■□□□□ 0.56
NEDD4P46934 CRB3P1-201ENST00000449338 276 ntBASIC18.52■□□□□ 0.56
NEDD4P46934 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.52■□□□□ 0.56
NEDD4P46934 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.52■□□□□ 0.56
NEDD4P46934 AC055876.2-201ENST00000531834 546 ntBASIC18.52■□□□□ 0.56
NEDD4P46934 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.52■□□□□ 0.56
NEDD4P46934 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.52■□□□□ 0.56
NEDD4P46934 AC015910.1-201ENST00000579400 975 ntBASIC18.52■□□□□ 0.56
NEDD4P46934 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
NEDD4P46934 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
NEDD4P46934 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.52■□□□□ 0.56
NEDD4P46934 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.52■□□□□ 0.56
NEDD4P46934 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.52■□□□□ 0.56
NEDD4P46934 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NEDD4P46934 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEDD4P46934 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEDD4P46934 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEDD4P46934 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEDD4P46934 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEDD4P46934 AC013268.4-201ENST00000637413 2228 ntBASIC18.52■□□□□ 0.55
NEDD4P46934 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NEDD4P46934 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 PIN1P1-201ENST00000412108 996 ntBASIC18.51■□□□□ 0.55
NEDD4P46934 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.51■□□□□ 0.55
NEDD4P46934 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.51■□□□□ 0.55
NEDD4P46934 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 KRT18P43-201ENST00000469825 1281 ntBASIC18.51■□□□□ 0.55
NEDD4P46934 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.51■□□□□ 0.55
NEDD4P46934 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.51■□□□□ 0.55
NEDD4P46934 RARRES2P5-201ENST00000564013 466 ntBASIC18.51■□□□□ 0.55
NEDD4P46934 MIR8072-201ENST00000614241 80 ntBASIC18.51■□□□□ 0.55
NEDD4P46934 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.51■□□□□ 0.55
NEDD4P46934 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.51■□□□□ 0.55
NEDD4P46934 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.51■□□□□ 0.55
NEDD4P46934 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
NEDD4P46934 AC020658.6-201ENST00000623564 1870 ntBASIC18.51■□□□□ 0.55
NEDD4P46934 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.51■□□□□ 0.55
NEDD4P46934 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.51■□□□□ 0.55
NEDD4P46934 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEDD4P46934 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.51■□□□□ 0.55
NEDD4P46934 AC138969.3-201ENST00000546612 1459 ntBASIC18.51■□□□□ 0.55
NEDD4P46934 AC138932.2-201ENST00000548268 1459 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms