Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC100850.1-201ENST00000506768 649 ntBASIC23.16■■□□□ 1.3
KDM5CP41229 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC23.16■■□□□ 1.3
KDM5CP41229 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KDM5CP41229 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC23.16■■□□□ 1.3
KDM5CP41229 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
KDM5CP41229 MTHFR-217ENST00000641820 1569 ntBASIC23.16■■□□□ 1.3
KDM5CP41229 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
KDM5CP41229 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
KDM5CP41229 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
KDM5CP41229 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KDM5CP41229 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
KDM5CP41229 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC23.15■■□□□ 1.3
KDM5CP41229 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
KDM5CP41229 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC23.15■■□□□ 1.3
KDM5CP41229 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC23.15■■□□□ 1.3
KDM5CP41229 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KDM5CP41229 AL645937.2-201ENST00000396808 931 ntBASIC23.15■■□□□ 1.3
KDM5CP41229 PDIA3P2-201ENST00000428073 158 ntBASIC23.15■■□□□ 1.3
KDM5CP41229 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC23.15■■□□□ 1.3
KDM5CP41229 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC23.15■■□□□ 1.3
KDM5CP41229 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KDM5CP41229 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
KDM5CP41229 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
KDM5CP41229 AC006480.2-201ENST00000609770 1337 ntBASIC23.15■■□□□ 1.3
KDM5CP41229 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KDM5CP41229 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
KDM5CP41229 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
KDM5CP41229 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC23.15■■□□□ 1.3
KDM5CP41229 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
KDM5CP41229 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KDM5CP41229 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
KDM5CP41229 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC23.15■■□□□ 1.3
KDM5CP41229 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KDM5CP41229 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
KDM5CP41229 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC23.14■■□□□ 1.3
KDM5CP41229 CEP164P1-201ENST00000455142 418 ntBASIC23.14■■□□□ 1.3
KDM5CP41229 RN7SL181P-201ENST00000462921 277 ntBASIC23.14■■□□□ 1.3
KDM5CP41229 AC104784.1-201ENST00000473096 294 ntBASIC23.14■■□□□ 1.3
KDM5CP41229 BNIP3P13-201ENST00000599968 566 ntBASIC23.14■■□□□ 1.3
KDM5CP41229 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC23.14■■□□□ 1.3
KDM5CP41229 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
KDM5CP41229 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
KDM5CP41229 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
KDM5CP41229 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
KDM5CP41229 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
KDM5CP41229 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC23.14■■□□□ 1.29
KDM5CP41229 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KDM5CP41229 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KDM5CP41229 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC23.14■■□□□ 1.29
KDM5CP41229 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC23.14■■□□□ 1.29
KDM5CP41229 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC23.14■■□□□ 1.29
KDM5CP41229 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KDM5CP41229 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KDM5CP41229 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
KDM5CP41229 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
KDM5CP41229 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC23.14■■□□□ 1.29
KDM5CP41229 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC23.14■■□□□ 1.29
KDM5CP41229 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC23.14■■□□□ 1.29
KDM5CP41229 AC106794.1-201ENST00000506935 792 ntBASIC23.14■■□□□ 1.29
KDM5CP41229 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC23.14■■□□□ 1.29
KDM5CP41229 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC23.14■■□□□ 1.29
KDM5CP41229 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
KDM5CP41229 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KDM5CP41229 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
KDM5CP41229 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
KDM5CP41229 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC23.13■■□□□ 1.29
KDM5CP41229 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC23.13■■□□□ 1.29
KDM5CP41229 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
KDM5CP41229 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
KDM5CP41229 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC23.13■■□□□ 1.29
KDM5CP41229 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 SLC16A6P1-201ENST00000413214 1059 ntBASIC23.13■■□□□ 1.29
KDM5CP41229 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC23.13■■□□□ 1.29
KDM5CP41229 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 GHSR-202ENST00000427970 912 ntBASIC23.13■■□□□ 1.29
KDM5CP41229 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC23.13■■□□□ 1.29
KDM5CP41229 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC23.13■■□□□ 1.29
KDM5CP41229 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC23.13■■□□□ 1.29
KDM5CP41229 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC23.13■■□□□ 1.29
KDM5CP41229 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC23.13■■□□□ 1.29
KDM5CP41229 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
KDM5CP41229 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KDM5CP41229 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC23.13■■□□□ 1.29
KDM5CP41229 AC006449.6-201ENST00000612330 2296 ntBASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms