Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.41■□□□□ 0.38
RFC5P40937 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.41■□□□□ 0.38
RFC5P40937 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC5P40937 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RFC5P40937 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC5P40937 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC5P40937 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC5P40937 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.41■□□□□ 0.38
RFC5P40937 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC5P40937 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFC5P40937 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 AC026691.1-201ENST00000602502 2017 ntBASIC17.4■□□□□ 0.38
RFC5P40937 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC5P40937 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC5P40937 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC5P40937 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFC5P40937 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC5P40937 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC5P40937 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFC5P40937 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC5P40937 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RFC5P40937 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFC5P40937 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 AC011495.1-201ENST00000498085 584 ntBASIC17.4■□□□□ 0.38
RFC5P40937 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.4■□□□□ 0.38
RFC5P40937 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.4■□□□□ 0.38
RFC5P40937 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC5P40937 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RFC5P40937 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC5P40937 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFC5P40937 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFC5P40937 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFC5P40937 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC5P40937 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
RFC5P40937 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.39■□□□□ 0.38
RFC5P40937 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.39■□□□□ 0.38
RFC5P40937 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RFC5P40937 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFC5P40937 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC5P40937 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFC5P40937 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFC5P40937 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 AL442647.2-201ENST00000429864 857 ntBASIC17.39■□□□□ 0.37
RFC5P40937 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.39■□□□□ 0.37
RFC5P40937 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC5P40937 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.39■□□□□ 0.37
RFC5P40937 RN7SL752P-201ENST00000463779 287 ntBASIC17.39■□□□□ 0.37
RFC5P40937 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.39■□□□□ 0.37
RFC5P40937 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC5P40937 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RFC5P40937 AC239800.4-201ENST00000603712 296 ntBASIC17.39■□□□□ 0.37
RFC5P40937 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC5P40937 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFC5P40937 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RFC5P40937 AC010491.1-201ENST00000563101 2797 ntBASIC17.39■□□□□ 0.37
RFC5P40937 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC5P40937 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC5P40937 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC5P40937 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RFC5P40937 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC5P40937 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC5P40937 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC5P40937 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC5P40937 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC5P40937 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC5P40937 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
RFC5P40937 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RFC5P40937 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
RFC5P40937 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms