Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.96□□□□□ -0.33
CEACAM3P40198 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.96□□□□□ -0.33
CEACAM3P40198 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CEACAM3P40198 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CEACAM3P40198 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
CEACAM3P40198 EEF1DP4-201ENST00000446006 880 ntBASIC12.96□□□□□ -0.33
CEACAM3P40198 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.96□□□□□ -0.33
CEACAM3P40198 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.96□□□□□ -0.33
CEACAM3P40198 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.96□□□□□ -0.33
CEACAM3P40198 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.96□□□□□ -0.33
CEACAM3P40198 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.96□□□□□ -0.33
CEACAM3P40198 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.96□□□□□ -0.33
CEACAM3P40198 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.96□□□□□ -0.33
CEACAM3P40198 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.96□□□□□ -0.33
CEACAM3P40198 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.96□□□□□ -0.33
CEACAM3P40198 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.96□□□□□ -0.33
CEACAM3P40198 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CEACAM3P40198 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.96□□□□□ -0.33
CEACAM3P40198 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CEACAM3P40198 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CEACAM3P40198 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CEACAM3P40198 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CEACAM3P40198 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CEACAM3P40198 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
CEACAM3P40198 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CEACAM3P40198 AC024909.3-201ENST00000611513 2257 ntBASIC12.96□□□□□ -0.34
CEACAM3P40198 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CEACAM3P40198 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
CEACAM3P40198 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
CEACAM3P40198 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CEACAM3P40198 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CEACAM3P40198 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.96□□□□□ -0.34
CEACAM3P40198 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.95□□□□□ -0.34
CEACAM3P40198 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CEACAM3P40198 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.95□□□□□ -0.34
CEACAM3P40198 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CEACAM3P40198 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.95□□□□□ -0.34
CEACAM3P40198 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CEACAM3P40198 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CEACAM3P40198 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CEACAM3P40198 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.95□□□□□ -0.34
CEACAM3P40198 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CEACAM3P40198 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CEACAM3P40198 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 AL512638.1-201ENST00000457493 794 ntBASIC12.95□□□□□ -0.34
CEACAM3P40198 PHKG1P2-201ENST00000457537 863 ntBASIC12.95□□□□□ -0.34
CEACAM3P40198 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
CEACAM3P40198 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.95□□□□□ -0.34
CEACAM3P40198 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.95□□□□□ -0.34
CEACAM3P40198 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.95□□□□□ -0.34
CEACAM3P40198 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.95□□□□□ -0.34
CEACAM3P40198 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.95□□□□□ -0.34
CEACAM3P40198 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.95□□□□□ -0.34
CEACAM3P40198 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.95□□□□□ -0.34
CEACAM3P40198 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CEACAM3P40198 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CEACAM3P40198 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.94□□□□□ -0.34
CEACAM3P40198 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms