Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
GRIK1P39086 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
GRIK1P39086 TOMM22P5-201ENST00000416399 439 ntBASIC16.65■□□□□ 0.26
GRIK1P39086 COX5BP8-201ENST00000416911 349 ntBASIC16.65■□□□□ 0.26
GRIK1P39086 AC098850.1-201ENST00000419919 790 ntBASIC16.65■□□□□ 0.26
GRIK1P39086 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.65■□□□□ 0.26
GRIK1P39086 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GRIK1P39086 RN7SL752P-201ENST00000463779 287 ntBASIC16.65■□□□□ 0.26
GRIK1P39086 RN7SL399P-201ENST00000471648 279 ntBASIC16.65■□□□□ 0.26
GRIK1P39086 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.65■□□□□ 0.26
GRIK1P39086 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.65■□□□□ 0.26
GRIK1P39086 AC036164.1-201ENST00000570544 333 ntBASIC16.65■□□□□ 0.26
GRIK1P39086 MIR8072-201ENST00000614241 80 ntBASIC16.65■□□□□ 0.26
GRIK1P39086 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.65■□□□□ 0.26
GRIK1P39086 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GRIK1P39086 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.65■□□□□ 0.26
GRIK1P39086 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GRIK1P39086 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.65■□□□□ 0.26
GRIK1P39086 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.65■□□□□ 0.26
GRIK1P39086 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GRIK1P39086 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GRIK1P39086 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
GRIK1P39086 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.64■□□□□ 0.26
GRIK1P39086 AC068587.6-202ENST00000641839 5619 ntBASIC16.64■□□□□ 0.26
GRIK1P39086 AL603832.2-201ENST00000566195 2125 ntBASIC16.64■□□□□ 0.25
GRIK1P39086 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GRIK1P39086 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GRIK1P39086 AC112504.1-201ENST00000623415 1841 ntBASIC16.64■□□□□ 0.25
GRIK1P39086 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GRIK1P39086 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GRIK1P39086 KRT17P7-201ENST00000451704 1104 ntBASIC16.64■□□□□ 0.25
GRIK1P39086 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.64■□□□□ 0.25
GRIK1P39086 ELK1P1-201ENST00000485699 580 ntBASIC16.64■□□□□ 0.25
GRIK1P39086 CR383656.12-201ENST00000549567 513 ntBASIC16.64■□□□□ 0.25
GRIK1P39086 CTBP2P3-201ENST00000585629 1255 ntBASIC16.64■□□□□ 0.25
GRIK1P39086 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GRIK1P39086 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GRIK1P39086 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GRIK1P39086 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.64■□□□□ 0.25
GRIK1P39086 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.64■□□□□ 0.25
GRIK1P39086 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.64■□□□□ 0.25
GRIK1P39086 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GRIK1P39086 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GRIK1P39086 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.64■□□□□ 0.25
GRIK1P39086 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GRIK1P39086 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 AC010491.1-201ENST00000563101 2797 ntBASIC16.63■□□□□ 0.25
GRIK1P39086 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.63■□□□□ 0.25
GRIK1P39086 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.63■□□□□ 0.25
GRIK1P39086 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.63■□□□□ 0.25
GRIK1P39086 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 MIR4313-201ENST00000580760 101 ntBASIC16.63■□□□□ 0.25
GRIK1P39086 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.63■□□□□ 0.25
GRIK1P39086 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
GRIK1P39086 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRIK1P39086 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
GRIK1P39086 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRIK1P39086 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRIK1P39086 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRIK1P39086 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRIK1P39086 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms