Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 CICP23-201ENST00000605013 2741 ntBASIC14.74□□□□□ -0.05
TNFRSF1BP20333 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AC105233.2-201ENST00000523697 349 ntBASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AF228730.5-201ENST00000530288 346 ntBASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AC027307.2-201ENST00000591252 911 ntBASIC14.73□□□□□ -0.05
TNFRSF1BP20333 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFRSF1BP20333 KRT8P44-201ENST00000441609 1350 ntBASIC14.73□□□□□ -0.05
TNFRSF1BP20333 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 RNA5SP410-201ENST00000516285 106 ntBASIC14.72□□□□□ -0.05
TNFRSF1BP20333 AC112191.1-201ENST00000523689 701 ntBASIC14.72□□□□□ -0.05
TNFRSF1BP20333 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 AL135744.1-201ENST00000565098 629 ntBASIC14.72□□□□□ -0.05
TNFRSF1BP20333 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFRSF1BP20333 AC024267.1-201ENST00000582320 895 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms