Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPA1P20036 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 AL607033.1-201ENST00000623900 1599 ntBASIC15.96■□□□□ 0.15
HLA-DPA1P20036 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.96■□□□□ 0.15
HLA-DPA1P20036 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
HLA-DPA1P20036 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DPA1P20036 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
HLA-DPA1P20036 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.96■□□□□ 0.14
HLA-DPA1P20036 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DPA1P20036 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.96■□□□□ 0.14
HLA-DPA1P20036 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DPA1P20036 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DPA1P20036 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 AL645939.2-201ENST00000427340 991 ntBASIC15.95■□□□□ 0.14
HLA-DPA1P20036 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 RN7SL618P-201ENST00000477850 296 ntBASIC15.95■□□□□ 0.14
HLA-DPA1P20036 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 AC027369.6-201ENST00000525520 931 ntBASIC15.95■□□□□ 0.14
HLA-DPA1P20036 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms