Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.45□□□□□ -0.1
CD53P19397 IGHV3-42-201ENST00000520410 361 ntBASIC14.45□□□□□ -0.1
CD53P19397 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CD53P19397 SLC25A39P2-201ENST00000537614 270 ntBASIC14.45□□□□□ -0.1
CD53P19397 KRT8P23-201ENST00000560090 1207 ntBASIC14.45□□□□□ -0.1
CD53P19397 LINC01225-203ENST00000563550 1244 ntBASIC14.45□□□□□ -0.1
CD53P19397 AC026150.2-201ENST00000564693 1156 ntBASIC14.45□□□□□ -0.1
CD53P19397 LINC02560-201ENST00000596379 459 ntBASIC14.45□□□□□ -0.1
CD53P19397 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
CD53P19397 AC008761.3-201ENST00000624803 892 ntBASIC14.45□□□□□ -0.1
CD53P19397 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.45□□□□□ -0.1
CD53P19397 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CD53P19397 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD53P19397 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.45□□□□□ -0.1
CD53P19397 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.45□□□□□ -0.1
CD53P19397 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CD53P19397 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CD53P19397 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CD53P19397 AL365209.1-201ENST00000624418 6473 ntBASIC14.45□□□□□ -0.1
CD53P19397 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 AC136621.1-201ENST00000624017 2304 ntBASIC14.44□□□□□ -0.1
CD53P19397 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.44□□□□□ -0.1
CD53P19397 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CD53P19397 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CD53P19397 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.44□□□□□ -0.1
CD53P19397 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CD53P19397 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.44□□□□□ -0.1
CD53P19397 SPDYE7P-202ENST00000420373 878 ntBASIC14.44□□□□□ -0.1
CD53P19397 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.44□□□□□ -0.1
CD53P19397 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.44□□□□□ -0.1
CD53P19397 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 GAPDHP21-201ENST00000450301 1010 ntBASIC14.44□□□□□ -0.1
CD53P19397 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.44□□□□□ -0.1
CD53P19397 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.44□□□□□ -0.1
CD53P19397 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.44□□□□□ -0.1
CD53P19397 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 AC005412.3-201ENST00000580309 715 ntBASIC14.44□□□□□ -0.1
CD53P19397 AL390754.1-201ENST00000619088 582 ntBASIC14.44□□□□□ -0.1
CD53P19397 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.44□□□□□ -0.1
CD53P19397 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.44□□□□□ -0.1
CD53P19397 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.44□□□□□ -0.1
CD53P19397 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.44□□□□□ -0.1
CD53P19397 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.44□□□□□ -0.1
CD53P19397 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD53P19397 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CD53P19397 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.43□□□□□ -0.1
CD53P19397 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.43□□□□□ -0.1
CD53P19397 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.43□□□□□ -0.1
CD53P19397 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CD53P19397 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.43□□□□□ -0.1
CD53P19397 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.43□□□□□ -0.1
CD53P19397 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 UXT-AS1-201ENST00000590504 1525 ntBASIC14.43□□□□□ -0.1
CD53P19397 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.43□□□□□ -0.1
CD53P19397 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD53P19397 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.43□□□□□ -0.1
CD53P19397 HMGA1P7-201ENST00000406908 502 ntBASIC14.43□□□□□ -0.1
CD53P19397 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms