Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.94□□□□□ -0.18
ATF1P18846 AC002347.1-201ENST00000569543 541 ntBASIC13.94□□□□□ -0.18
ATF1P18846 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.94□□□□□ -0.18
ATF1P18846 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.94□□□□□ -0.18
ATF1P18846 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.94□□□□□ -0.18
ATF1P18846 SLC25A6P4-201ENST00000586535 553 ntBASIC13.94□□□□□ -0.18
ATF1P18846 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATF1P18846 AC104581.4-201ENST00000623126 3052 ntBASIC13.94□□□□□ -0.18
ATF1P18846 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.94□□□□□ -0.18
ATF1P18846 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.94□□□□□ -0.18
ATF1P18846 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.94□□□□□ -0.18
ATF1P18846 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATF1P18846 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATF1P18846 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.94□□□□□ -0.18
ATF1P18846 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.94□□□□□ -0.18
ATF1P18846 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATF1P18846 AC126365.1-201ENST00000578585 1514 ntBASIC13.94□□□□□ -0.18
ATF1P18846 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATF1P18846 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.94□□□□□ -0.18
ATF1P18846 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ATF1P18846 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATF1P18846 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATF1P18846 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATF1P18846 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.94□□□□□ -0.18
ATF1P18846 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.94□□□□□ -0.18
ATF1P18846 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATF1P18846 AP001282.1-201ENST00000531301 1499 ntBASIC13.93□□□□□ -0.18
ATF1P18846 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.93□□□□□ -0.18
ATF1P18846 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.93□□□□□ -0.18
ATF1P18846 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.93□□□□□ -0.18
ATF1P18846 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ATF1P18846 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.93□□□□□ -0.18
ATF1P18846 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.93□□□□□ -0.18
ATF1P18846 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.93□□□□□ -0.18
ATF1P18846 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.93□□□□□ -0.18
ATF1P18846 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.93□□□□□ -0.18
ATF1P18846 KRT126P-201ENST00000549467 1181 ntBASIC13.93□□□□□ -0.18
ATF1P18846 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.93□□□□□ -0.18
ATF1P18846 MIR4321-201ENST00000592276 80 ntBASIC13.93□□□□□ -0.18
ATF1P18846 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.93□□□□□ -0.18
ATF1P18846 AC064836.3-201ENST00000607928 673 ntBASIC13.93□□□□□ -0.18
ATF1P18846 AL161645.1-201ENST00000622716 1255 ntBASIC13.93□□□□□ -0.18
ATF1P18846 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.93□□□□□ -0.18
ATF1P18846 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATF1P18846 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ATF1P18846 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATF1P18846 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATF1P18846 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.92□□□□□ -0.18
ATF1P18846 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.92□□□□□ -0.18
ATF1P18846 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATF1P18846 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATF1P18846 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATF1P18846 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ATF1P18846 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATF1P18846 WASH6P-202ENST00000359512 1437 ntBASIC13.92□□□□□ -0.18
ATF1P18846 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ATF1P18846 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATF1P18846 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.92□□□□□ -0.18
ATF1P18846 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.92□□□□□ -0.18
ATF1P18846 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.92□□□□□ -0.18
ATF1P18846 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATF1P18846 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ATF1P18846 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ATF1P18846 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATF1P18846 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ATF1P18846 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.92□□□□□ -0.18
ATF1P18846 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms