Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC20.34■□□□□ 0.85
MS4A1P11836 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC20.34■□□□□ 0.85
MS4A1P11836 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC20.34■□□□□ 0.85
MS4A1P11836 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MS4A1P11836 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MS4A1P11836 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
MS4A1P11836 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MS4A1P11836 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MS4A1P11836 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MS4A1P11836 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MS4A1P11836 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.34■□□□□ 0.85
MS4A1P11836 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC20.33■□□□□ 0.85
MS4A1P11836 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
MS4A1P11836 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MS4A1P11836 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MS4A1P11836 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.33■□□□□ 0.85
MS4A1P11836 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MS4A1P11836 ING5-213ENST00000636051 4199 ntTSL 5 BASIC20.33■□□□□ 0.85
MS4A1P11836 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MS4A1P11836 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.85
MS4A1P11836 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MS4A1P11836 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.33■□□□□ 0.85
MS4A1P11836 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.33■□□□□ 0.85
MS4A1P11836 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
MS4A1P11836 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MS4A1P11836 FAM58DP-201ENST00000428076 619 ntBASIC20.33■□□□□ 0.85
MS4A1P11836 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MS4A1P11836 AC093520.2-201ENST00000561830 333 ntBASIC20.33■□□□□ 0.85
MS4A1P11836 MIR4313-201ENST00000580760 101 ntBASIC20.33■□□□□ 0.85
MS4A1P11836 AC010327.4-202ENST00000591484 748 ntBASIC20.33■□□□□ 0.85
MS4A1P11836 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.33■□□□□ 0.85
MS4A1P11836 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.33■□□□□ 0.85
MS4A1P11836 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MS4A1P11836 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MS4A1P11836 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
MS4A1P11836 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
MS4A1P11836 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.33■□□□□ 0.84
MS4A1P11836 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
MS4A1P11836 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MS4A1P11836 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MS4A1P11836 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
MS4A1P11836 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
MS4A1P11836 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.32■□□□□ 0.84
MS4A1P11836 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
MS4A1P11836 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MS4A1P11836 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
MS4A1P11836 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.32■□□□□ 0.84
MS4A1P11836 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
MS4A1P11836 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.32■□□□□ 0.84
MS4A1P11836 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.32■□□□□ 0.84
MS4A1P11836 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.32■□□□□ 0.84
MS4A1P11836 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC20.32■□□□□ 0.84
MS4A1P11836 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.32■□□□□ 0.84
MS4A1P11836 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
MS4A1P11836 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 TCAF2P1-201ENST00000291129 2421 ntBASIC20.32■□□□□ 0.84
MS4A1P11836 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A1P11836 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC20.31■□□□□ 0.84
MS4A1P11836 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC20.31■□□□□ 0.84
MS4A1P11836 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
MS4A1P11836 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
MS4A1P11836 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.31■□□□□ 0.84
MS4A1P11836 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.31■□□□□ 0.84
MS4A1P11836 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.31■□□□□ 0.84
MS4A1P11836 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.31■□□□□ 0.84
MS4A1P11836 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.31■□□□□ 0.84
MS4A1P11836 AC105021.1-202ENST00000570572 669 ntBASIC20.31■□□□□ 0.84
MS4A1P11836 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
MS4A1P11836 AC009093.7-201ENST00000623853 1223 ntBASIC20.31■□□□□ 0.84
MS4A1P11836 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 AL035456.1-201ENST00000456064 1369 ntBASIC20.31■□□□□ 0.84
MS4A1P11836 AC023908.3-201ENST00000564211 3047 ntBASIC20.31■□□□□ 0.84
MS4A1P11836 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A1P11836 AP003680.1-201ENST00000598970 3660 ntBASIC20.31■□□□□ 0.84
MS4A1P11836 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms