Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CTSDP07339 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.18□□□□□ -0.3
CTSDP07339 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CTSDP07339 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.18□□□□□ -0.3
CTSDP07339 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.18□□□□□ -0.3
CTSDP07339 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CTSDP07339 AL009183.1-201ENST00000603760 355 ntBASIC13.18□□□□□ -0.3
CTSDP07339 IFNL4P1-201ENST00000607083 540 ntBASIC13.18□□□□□ -0.3
CTSDP07339 AC008735.5-201ENST00000623544 497 ntBASIC13.18□□□□□ -0.3
CTSDP07339 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSDP07339 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.17□□□□□ -0.3
CTSDP07339 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
CTSDP07339 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CTSDP07339 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CTSDP07339 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CTSDP07339 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CTSDP07339 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSDP07339 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.17□□□□□ -0.3
CTSDP07339 SAPCD2P3-201ENST00000455031 850 ntBASIC13.17□□□□□ -0.3
CTSDP07339 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSDP07339 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
CTSDP07339 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.17□□□□□ -0.3
CTSDP07339 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSDP07339 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 AC105339.3-201ENST00000560043 636 ntBASIC13.17□□□□□ -0.3
CTSDP07339 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSDP07339 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.17□□□□□ -0.3
CTSDP07339 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.17□□□□□ -0.3
CTSDP07339 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CTSDP07339 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 REXO1L1P-202ENST00000608646 1974 ntBASIC13.17□□□□□ -0.3
CTSDP07339 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CTSDP07339 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CTSDP07339 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CTSDP07339 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CTSDP07339 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CTSDP07339 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSDP07339 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CTSDP07339 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSDP07339 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms