Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 KRT8P29-201ENST00000420409 1371 ntBASIC9.59□□□□□ -0.87
APOBP04114 AC011477.6-201ENST00000604980 1927 ntBASIC9.59□□□□□ -0.87
APOBP04114 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
APOBP04114 LSM5-207ENST00000410044 687 ntTSL 3 BASIC9.59□□□□□ -0.87
APOBP04114 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC9.59□□□□□ -0.87
APOBP04114 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 AL118516.1-201ENST00000564152 670 ntBASIC9.59□□□□□ -0.87
APOBP04114 STUB1-204ENST00000564370 875 ntTSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
APOBP04114 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC9.58□□□□□ -0.88
APOBP04114 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 MIR4313-201ENST00000580760 101 ntBASIC9.58□□□□□ -0.88
APOBP04114 AC005632.3-201ENST00000605544 308 ntBASIC9.58□□□□□ -0.88
APOBP04114 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC9.58□□□□□ -0.88
APOBP04114 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
APOBP04114 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
APOBP04114 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
APOBP04114 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 B9D1-203ENST00000395615 805 ntTSL 3 BASIC9.58□□□□□ -0.88
APOBP04114 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC9.58□□□□□ -0.88
APOBP04114 AC073150.1-201ENST00000450406 1084 ntBASIC9.58□□□□□ -0.88
APOBP04114 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC9.58□□□□□ -0.88
APOBP04114 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC9.58□□□□□ -0.88
APOBP04114 AC005324.6-201ENST00000587972 613 ntBASIC9.58□□□□□ -0.88
APOBP04114 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC9.58□□□□□ -0.88
APOBP04114 DIO1-215ENST00000610607 796 ntTSL 5 BASIC9.58□□□□□ -0.88
APOBP04114 AC148477.9-201ENST00000623974 539 ntBASIC9.58□□□□□ -0.88
APOBP04114 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
APOBP04114 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 REXO1L5P-201ENST00000622260 2098 ntBASIC9.58□□□□□ -0.88
APOBP04114 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 AC114812.1-204ENST00000449669 728 ntBASIC9.58□□□□□ -0.88
APOBP04114 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC9.58□□□□□ -0.88
APOBP04114 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
APOBP04114 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 RPS15-201ENST00000233609 534 ntTSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC9.58□□□□□ -0.88
APOBP04114 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 RPS15-205ENST00000586686 562 ntTSL 5 BASIC9.58□□□□□ -0.88
APOBP04114 RPS15-208ENST00000591804 711 ntTSL 5 BASIC9.58□□□□□ -0.88
APOBP04114 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
APOBP04114 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC9.58□□□□□ -0.88
APOBP04114 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 AC025271.4-201ENST00000621477 1726 ntBASIC9.57□□□□□ -0.88
APOBP04114 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
APOBP04114 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
APOBP04114 AMT-224ENST00000635808 1610 ntTSL 5 BASIC9.57□□□□□ -0.88
APOBP04114 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 SCARNA21-201ENST00000517026 139 ntBASIC9.57□□□□□ -0.88
APOBP04114 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC9.57□□□□□ -0.88
APOBP04114 AC027237.1-201ENST00000560942 655 ntBASIC9.57□□□□□ -0.88
APOBP04114 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC9.57□□□□□ -0.88
APOBP04114 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC9.57□□□□□ -0.88
APOBP04114 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms