Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.24■□□□□ 0.35
VTNP04004 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 AC112504.1-201ENST00000623415 1841 ntBASIC17.24■□□□□ 0.35
VTNP04004 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.23■□□□□ 0.35
VTNP04004 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.23■□□□□ 0.35
VTNP04004 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.23■□□□□ 0.35
VTNP04004 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.23■□□□□ 0.35
VTNP04004 BCRP2-202ENST00000447763 634 ntBASIC17.23■□□□□ 0.35
VTNP04004 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 BCRP6-201ENST00000510112 632 ntBASIC17.23■□□□□ 0.35
VTNP04004 BCRP7-201ENST00000511549 544 ntBASIC17.23■□□□□ 0.35
VTNP04004 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.23■□□□□ 0.35
VTNP04004 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.23■□□□□ 0.35
VTNP04004 AC005252.2-201ENST00000624630 1141 ntBASIC17.23■□□□□ 0.35
VTNP04004 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.23■□□□□ 0.35
VTNP04004 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.23■□□□□ 0.35
VTNP04004 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.23■□□□□ 0.35
VTNP04004 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VTNP04004 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.23■□□□□ 0.35
VTNP04004 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VTNP04004 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VTNP04004 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTNP04004 AL603832.2-201ENST00000566195 2125 ntBASIC17.23■□□□□ 0.35
VTNP04004 AC099398.1-201ENST00000567919 2776 ntBASIC17.23■□□□□ 0.35
VTNP04004 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 DRD5P1-201ENST00000456605 1438 ntBASIC17.22■□□□□ 0.35
VTNP04004 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.22■□□□□ 0.35
VTNP04004 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VTNP04004 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
VTNP04004 AL133267.1-201ENST00000398220 340 ntBASIC17.22■□□□□ 0.35
VTNP04004 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.22■□□□□ 0.35
VTNP04004 KRT43P-201ENST00000434019 910 ntBASIC17.22■□□□□ 0.35
VTNP04004 RPS2P32-201ENST00000439199 892 ntBASIC17.22■□□□□ 0.35
VTNP04004 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VTNP04004 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.22■□□□□ 0.35
VTNP04004 AC068587.3-201ENST00000526613 355 ntBASIC17.22■□□□□ 0.35
VTNP04004 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.22■□□□□ 0.35
VTNP04004 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.22■□□□□ 0.35
VTNP04004 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.22■□□□□ 0.35
VTNP04004 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VTNP04004 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.22■□□□□ 0.35
VTNP04004 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 AL118508.1-201ENST00000613502 2345 ntBASIC17.22■□□□□ 0.35
VTNP04004 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.22■□□□□ 0.35
VTNP04004 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 CYP2T1P-202ENST00000641596 2535 ntBASIC17.22■□□□□ 0.35
VTNP04004 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTNP04004 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.22■□□□□ 0.35
VTNP04004 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VTNP04004 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
VTNP04004 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VTNP04004 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms