Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC245100.5-201ENST00000452108 331 ntBASIC16.2■□□□□ 0.18
MT-ND3P03897 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.2■□□□□ 0.18
MT-ND3P03897 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MT-ND3P03897 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.2■□□□□ 0.18
MT-ND3P03897 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 AP002472.1-201ENST00000577490 586 ntBASIC16.2■□□□□ 0.18
MT-ND3P03897 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.2■□□□□ 0.18
MT-ND3P03897 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.2■□□□□ 0.18
MT-ND3P03897 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MT-ND3P03897 AC091812.2-201ENST00000619081 385 ntBASIC16.2■□□□□ 0.18
MT-ND3P03897 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MT-ND3P03897 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MT-ND3P03897 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-ND3P03897 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MT-ND3P03897 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MT-ND3P03897 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND3P03897 FAM45BP-202ENST00000592932 1624 ntBASIC16.19■□□□□ 0.18
MT-ND3P03897 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-ND3P03897 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-ND3P03897 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 AC105250.1-201ENST00000509378 2057 ntBASIC16.19■□□□□ 0.18
MT-ND3P03897 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MT-ND3P03897 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MT-ND3P03897 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND3P03897 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-ND3P03897 AL031432.2-201ENST00000566714 459 ntBASIC16.19■□□□□ 0.18
MT-ND3P03897 AL928711.1-201ENST00000570165 459 ntBASIC16.19■□□□□ 0.18
MT-ND3P03897 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MT-ND3P03897 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.19■□□□□ 0.18
MT-ND3P03897 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
MT-ND3P03897 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MT-ND3P03897 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND3P03897 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.19■□□□□ 0.18
MT-ND3P03897 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 AC090616.6-203ENST00000579186 1945 ntBASIC16.19■□□□□ 0.18
MT-ND3P03897 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-ND3P03897 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
MT-ND3P03897 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND3P03897 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND3P03897 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND3P03897 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.19■□□□□ 0.18
MT-ND3P03897 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MT-ND3P03897 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MT-ND3P03897 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-ND3P03897 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-ND3P03897 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
MT-ND3P03897 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-ND3P03897 AC004835.2-201ENST00000603762 682 ntBASIC16.18■□□□□ 0.18
MT-ND3P03897 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-ND3P03897 AL645728.2-201ENST00000641974 660 ntBASIC16.18■□□□□ 0.18
MT-ND3P03897 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms