Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT6AP02538 AC018892.3-201ENST00000623986 2499 ntBASIC15.39■□□□□ 0.05
KRT6AP02538 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 AC090616.6-203ENST00000579186 1945 ntBASIC15.39■□□□□ 0.05
KRT6AP02538 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT6AP02538 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT6AP02538 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
KRT6AP02538 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT6AP02538 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.38■□□□□ 0.05
KRT6AP02538 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
KRT6AP02538 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 OR2I1P-209ENST00000641730 5365 ntBASIC15.38■□□□□ 0.05
KRT6AP02538 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
KRT6AP02538 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
KRT6AP02538 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.38■□□□□ 0.05
KRT6AP02538 CYP4F24P-201ENST00000586049 1580 ntBASIC15.38■□□□□ 0.05
KRT6AP02538 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
KRT6AP02538 AL022342.1-201ENST00000400363 863 ntBASIC15.38■□□□□ 0.05
KRT6AP02538 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.38■□□□□ 0.05
KRT6AP02538 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.38■□□□□ 0.05
KRT6AP02538 AC055717.3-201ENST00000622967 595 ntBASIC15.38■□□□□ 0.05
KRT6AP02538 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.38■□□□□ 0.05
KRT6AP02538 AC023157.3-201ENST00000619086 2088 ntBASIC15.38■□□□□ 0.05
KRT6AP02538 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
KRT6AP02538 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.38■□□□□ 0.05
KRT6AP02538 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT6AP02538 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT6AP02538 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
KRT6AP02538 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.37■□□□□ 0.05
KRT6AP02538 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
KRT6AP02538 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 AP3S2-216ENST00000617003 1561 ntBASIC15.37■□□□□ 0.05
KRT6AP02538 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.37■□□□□ 0.05
KRT6AP02538 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
KRT6AP02538 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.37■□□□□ 0.05
KRT6AP02538 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.37■□□□□ 0.05
KRT6AP02538 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
KRT6AP02538 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
KRT6AP02538 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.37■□□□□ 0.05
KRT6AP02538 PHKG1P2-201ENST00000457537 863 ntBASIC15.37■□□□□ 0.05
KRT6AP02538 AC069335.1-201ENST00000489972 472 ntBASIC15.37■□□□□ 0.05
KRT6AP02538 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.37■□□□□ 0.05
KRT6AP02538 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.37■□□□□ 0.05
KRT6AP02538 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.37■□□□□ 0.05
KRT6AP02538 SLC25A39P2-201ENST00000537614 270 ntBASIC15.37■□□□□ 0.05
KRT6AP02538 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.37■□□□□ 0.05
KRT6AP02538 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.37■□□□□ 0.05
KRT6AP02538 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.37■□□□□ 0.05
KRT6AP02538 MIR4313-201ENST00000580760 101 ntBASIC15.37■□□□□ 0.05
KRT6AP02538 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
KRT6AP02538 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
KRT6AP02538 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
KRT6AP02538 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
KRT6AP02538 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.37■□□□□ 0.05
KRT6AP02538 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT6AP02538 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms