Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
CPNE6O95741 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CPNE6O95741 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.55■□□□□ 0.08
CPNE6O95741 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CPNE6O95741 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE6O95741 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.55■□□□□ 0.08
CPNE6O95741 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CPNE6O95741 MEP1AP4-201ENST00000423244 1087 ntBASIC15.55■□□□□ 0.08
CPNE6O95741 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 MIR4321-201ENST00000592276 80 ntBASIC15.55■□□□□ 0.08
CPNE6O95741 SRD5A3P1-201ENST00000603021 949 ntBASIC15.55■□□□□ 0.08
CPNE6O95741 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE6O95741 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.55■□□□□ 0.08
CPNE6O95741 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CPNE6O95741 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CPNE6O95741 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CPNE6O95741 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE6O95741 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE6O95741 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE6O95741 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CPNE6O95741 SLC7A15P-201ENST00000424028 1363 ntBASIC15.54■□□□□ 0.08
CPNE6O95741 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CPNE6O95741 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE6O95741 AP006294.1-201ENST00000415407 339 ntBASIC15.54■□□□□ 0.08
CPNE6O95741 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE6O95741 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE6O95741 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE6O95741 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE6O95741 AC055876.2-201ENST00000531834 546 ntBASIC15.54■□□□□ 0.08
CPNE6O95741 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE6O95741 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE6O95741 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE6O95741 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CPNE6O95741 AL596087.1-201ENST00000400979 1969 ntBASIC15.54■□□□□ 0.08
CPNE6O95741 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
CPNE6O95741 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CPNE6O95741 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE6O95741 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE6O95741 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE6O95741 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE6O95741 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.53■□□□□ 0.08
CPNE6O95741 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE6O95741 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE6O95741 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.53■□□□□ 0.08
CPNE6O95741 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE6O95741 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE6O95741 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms