Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
SIX6O95475 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SIX6O95475 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SIX6O95475 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SIX6O95475 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.3□□□□□ -0.28
SIX6O95475 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
SIX6O95475 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SIX6O95475 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SIX6O95475 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.3□□□□□ -0.28
SIX6O95475 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.29□□□□□ -0.28
SIX6O95475 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 HSPA7-201ENST00000445535 1927 ntBASIC13.29□□□□□ -0.28
SIX6O95475 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SIX6O95475 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
SIX6O95475 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.29□□□□□ -0.28
SIX6O95475 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 ARMC10P1-201ENST00000313754 855 ntBASIC13.29□□□□□ -0.28
SIX6O95475 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
SIX6O95475 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.29□□□□□ -0.28
SIX6O95475 SPDYE13P-201ENST00000445314 798 ntBASIC13.29□□□□□ -0.28
SIX6O95475 YBX1P2-201ENST00000489612 999 ntBASIC13.29□□□□□ -0.28
SIX6O95475 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SIX6O95475 AC087641.1-201ENST00000557561 1021 ntBASIC13.29□□□□□ -0.28
SIX6O95475 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.29□□□□□ -0.28
SIX6O95475 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.29□□□□□ -0.28
SIX6O95475 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SIX6O95475 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.29□□□□□ -0.28
SIX6O95475 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.29□□□□□ -0.28
SIX6O95475 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
SIX6O95475 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SIX6O95475 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SIX6O95475 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.29□□□□□ -0.28
SIX6O95475 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SIX6O95475 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.29□□□□□ -0.28
SIX6O95475 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SIX6O95475 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.29□□□□□ -0.28
SIX6O95475 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.29□□□□□ -0.28
SIX6O95475 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.28□□□□□ -0.28
SIX6O95475 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SIX6O95475 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.28□□□□□ -0.28
SIX6O95475 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.28□□□□□ -0.28
SIX6O95475 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms