Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.94■□□□□ 0.14
GPC4O75487 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.94■□□□□ 0.14
GPC4O75487 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
GPC4O75487 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
GPC4O75487 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
GPC4O75487 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.93■□□□□ 0.14
GPC4O75487 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.93■□□□□ 0.14
GPC4O75487 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.93■□□□□ 0.14
GPC4O75487 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
GPC4O75487 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.93■□□□□ 0.14
GPC4O75487 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.93■□□□□ 0.14
GPC4O75487 AC023141.5-201ENST00000458585 616 ntBASIC15.93■□□□□ 0.14
GPC4O75487 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.93■□□□□ 0.14
GPC4O75487 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.93■□□□□ 0.14
GPC4O75487 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.93■□□□□ 0.14
GPC4O75487 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.93■□□□□ 0.14
GPC4O75487 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.93■□□□□ 0.14
GPC4O75487 AC139530.3-201ENST00000620344 690 ntBASIC15.93■□□□□ 0.14
GPC4O75487 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
GPC4O75487 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.93■□□□□ 0.14
GPC4O75487 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.93■□□□□ 0.14
GPC4O75487 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GPC4O75487 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
GPC4O75487 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.92■□□□□ 0.14
GPC4O75487 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
GPC4O75487 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.92■□□□□ 0.14
GPC4O75487 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
GPC4O75487 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.92■□□□□ 0.14
GPC4O75487 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
GPC4O75487 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.92■□□□□ 0.14
GPC4O75487 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.92■□□□□ 0.14
GPC4O75487 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.92■□□□□ 0.14
GPC4O75487 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.92■□□□□ 0.14
GPC4O75487 ALG1L8P-201ENST00000533887 760 ntBASIC15.92■□□□□ 0.14
GPC4O75487 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.92■□□□□ 0.14
GPC4O75487 SNHG9-202ENST00000564014 471 ntBASIC15.92■□□□□ 0.14
GPC4O75487 RARRES2P9-201ENST00000565168 469 ntBASIC15.92■□□□□ 0.14
GPC4O75487 AC027612.4-201ENST00000605371 583 ntBASIC15.92■□□□□ 0.14
GPC4O75487 AL596442.2-201ENST00000610240 980 ntBASIC15.92■□□□□ 0.14
GPC4O75487 AL691403.2-201ENST00000618460 490 ntBASIC15.92■□□□□ 0.14
GPC4O75487 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
GPC4O75487 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
GPC4O75487 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
GPC4O75487 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
GPC4O75487 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GPC4O75487 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.91■□□□□ 0.14
GPC4O75487 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.91■□□□□ 0.14
GPC4O75487 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.91■□□□□ 0.14
GPC4O75487 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms